Metadata

Creating metadata from the filenames to get well and site information is essential to analyze your images.

Having a layout for your plate is also important, and you can also get information from that layout.

Apps/notebooks

To create the metadata for your experiment containing information about the assay, like compound, concentration, etc, follow the instructions to use the Layout to CSV app.

To create metadata about image location and minimal information such as well, site, and plate, follow the instructions to use the Load Data Generator app

Materials

1. Presentation about organizing metadata from the images and from the assay:

   • video in PT and Q&A

2. How to use the two apps Layout to CSV and Load Data Generator

   • video in PT and Q&A

3. Using LoadData from CellProfiler to upload your images and metadata:

   • video in PT